Tuberculosis Models

TB model

Public fields

model

TBM in TMB code

current_pars

the parameters used for model simulation

Active bindings

output

return model's simulation

Methods

Public methods

• TBM$new()

• TBM$update_pars()

• TBM$plot()

• TBM$clone()

---

Method new()

Init the model

Usage

TBM$new(pars = NULL, tmax = 150, dt = 1)

Arguments

pars

A named vectors of parameters, must matched with the existing parameters (see pars_moldova for details)

tmax

Maximum number of years to simulate

dt

Time steps, default to 1

Returns

NULL

---

Method update_pars()

update model's parameters

Usage

TBM$update_pars(pars)

Arguments

pars

a named vector of parameters

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Method plot()

plot model dynamic

Usage

TBM$plot(states = c("S", "AS1", "LS1", "IS1"))

Arguments

states

list of model states to plot

Returns

a ggplot object.

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Method clone()

The objects of this class are cloneable with this method.

Usage

TBM$clone(deep = FALSE)

Arguments

deep

Whether to make a deep clone.